Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 AC022682.1-201ENSMUST00000224624 2023 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm12912-201ENSMUST00000121596 1381 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm23132-201ENSMUST00000104254 132 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm22495-201ENSMUST00000104492 126 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm15374-201ENSMUST00000119313 844 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm16228-201ENSMUST00000162286 809 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm30946-201ENSMUST00000198288 724 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm42599-201ENSMUST00000201308 469 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm30055-201ENSMUST00000203175 803 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.62□□□□□ -0.23
NpcdF8VQB8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NpcdF8VQB8 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm24933-201ENSMUST00000103762 110 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm23252-201ENSMUST00000103776 110 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm13284-201ENSMUST00000121020 547 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm25394-201ENSMUST00000157338 133 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm26443-201ENSMUST00000179610 110 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm26875-201ENSMUST00000181006 950 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Id2-203ENSMUST00000222667 958 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.61□□□□□ -0.23
NpcdF8VQB8 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NpcdF8VQB8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.6□□□□□ -0.23
NpcdF8VQB8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms