Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm15033-201ENSMUST00000118188 673 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm23899-201ENSMUST00000158112 90 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Olfml3-204ENSMUST00000169286 874 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm19246-201ENSMUST00000173599 255 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Mir6930-201ENSMUST00000183859 68 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm3791-201ENSMUST00000220790 768 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Rce1-203ENSMUST00000224707 1255 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm6378-201ENSMUST00000084199 444 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.37□□□□□ -0.59
Ccdc188F6WEU2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm13857-201ENSMUST00000139645 173 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.36□□□□□ -0.59
Ccdc188F6WEU2 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc188F6WEU2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms