Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Gm4978-201ENSMUST00000071565 801 ntBASIC12.5□□□□□ -0.41
Brpf3B2KF05 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.5□□□□□ -0.41
Brpf3B2KF05 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.5□□□□□ -0.41
Brpf3B2KF05 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.5□□□□□ -0.41
Brpf3B2KF05 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Rims2-204ENSMUST00000226410 3685 ntBASIC12.5□□□□□ -0.41
Brpf3B2KF05 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brpf3B2KF05 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm15617-201ENSMUST00000118973 771 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Mir1982-201ENSMUST00000157368 74 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Snora78-201ENSMUST00000158630 128 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm27046-201ENSMUST00000182160 463 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm8343-201ENSMUST00000182705 994 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm31256-201ENSMUST00000194705 506 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm18054-201ENSMUST00000207539 555 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brpf3B2KF05 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.48□□□□□ -0.41
Brpf3B2KF05 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.48□□□□□ -0.41
Brpf3B2KF05 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.48□□□□□ -0.41
Brpf3B2KF05 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.48□□□□□ -0.41
Brpf3B2KF05 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Gm22133-201ENSMUST00000102082 109 ntBASIC12.48□□□□□ -0.41
Brpf3B2KF05 Snord17-201ENSMUST00000104526 238 ntBASIC12.48□□□□□ -0.41
Brpf3B2KF05 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.48□□□□□ -0.41
Brpf3B2KF05 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms