Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac6Q9Z2V5 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.14□□□□□ -0.15
Hdac6Q9Z2V5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac6Q9Z2V5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hdac6Q9Z2V5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Btrc-209ENSMUST00000224478 2194 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Mir1249-201ENSMUST00000116791 98 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm44640-201ENSMUST00000206894 247 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.12□□□□□ -0.15
Hdac6Q9Z2V5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.11□□□□□ -0.15
Hdac6Q9Z2V5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms