Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm19353-201ENSMUST00000184561 445 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm38151-201ENSMUST00000195085 289 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Spcs1-203ENSMUST00000226374 592 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm1821-202ENSMUST00000227415 750 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm10254-201ENSMUST00000052888 867 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sec61a2Q9JLR1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm13916-201ENSMUST00000117368 628 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm23085-201ENSMUST00000157849 293 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm43966-201ENSMUST00000203301 612 ntBASIC10.18□□□□□ -0.78
Sec61a2Q9JLR1 Gm44100-201ENSMUST00000204329 436 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms