Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm11560-201ENSMUST00000117567 948 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm16030-201ENSMUST00000159098 603 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm17192-201ENSMUST00000169031 511 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm19587-201ENSMUST00000191395 545 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim54Q9ERP3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm13549-201ENSMUST00000118339 796 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm8302-201ENSMUST00000119217 852 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Olfml3-204ENSMUST00000169286 874 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim54Q9ERP3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim54Q9ERP3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms