Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm15573-201ENSMUST00000119487 540 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm15566-201ENSMUST00000121130 590 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm4310-201ENSMUST00000177847 889 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm9132-201ENSMUST00000210182 832 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm13916-201ENSMUST00000117368 628 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm11500-201ENSMUST00000118237 601 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm12463-201ENSMUST00000118271 849 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm38117-201ENSMUST00000194653 939 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm5714-201ENSMUST00000197343 566 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tubb3Q9ERD7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tubb3Q9ERD7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms