Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3a3Q9D554 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm14071-201ENSMUST00000117817 509 ntBASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.34□□□□□ -0.59
Sf3a3Q9D554 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.34□□□□□ -0.59
Sf3a3Q9D554 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Sf3a3Q9D554 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Sf3a3Q9D554 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sf3a3Q9D554 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm11989-201ENSMUST00000117240 672 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm11362-201ENSMUST00000118838 850 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm13297-201ENSMUST00000120205 934 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm29127-201ENSMUST00000188304 517 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.33□□□□□ -0.6
Sf3a3Q9D554 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3a3Q9D554 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms