Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm24844-201ENSMUST00000158679 127 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Khdc3Q9CWU5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gm7504-201ENSMUST00000201449 424 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gm5996-201ENSMUST00000211110 718 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Ginm1-202ENSMUST00000065124 300 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Khdc3Q9CWU5 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Btrc-209ENSMUST00000224478 2194 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm14193-201ENSMUST00000105067 153 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.83□□□□□ -0.68
Khdc3Q9CWU5 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms