Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm5259-201ENSMUST00000191231 800 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm44664-201ENSMUST00000206841 1786 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm13002-201ENSMUST00000119286 682 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm33080-201ENSMUST00000205429 172 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm16439-201ENSMUST00000100687 564 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm11929-201ENSMUST00000118175 945 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm23899-201ENSMUST00000158112 90 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm44388-201ENSMUST00000204350 258 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm14021-201ENSMUST00000117683 961 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm24597-201ENSMUST00000122503 300 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm7539-201ENSMUST00000189789 630 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Gm3198-201ENSMUST00000208725 1026 ntBASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh23Q99PF4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm8661-201ENSMUST00000118688 992 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm14111-201ENSMUST00000119851 999 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 AC155293.1-201ENSMUST00000219793 1026 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Gm8055-201ENSMUST00000099956 1008 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh23Q99PF4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms