Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trem2Q99NH8 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.49□□□□□ -0.57
Trem2Q99NH8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
Trem2Q99NH8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.49□□□□□ -0.57
Trem2Q99NH8 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trem2Q99NH8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.48□□□□□ -0.57
Trem2Q99NH8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Gm23045-201ENSMUST00000175041 96 ntBASIC11.48□□□□□ -0.57
Trem2Q99NH8 Gm4654-201ENSMUST00000183305 982 ntBASIC11.48□□□□□ -0.57
Trem2Q99NH8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.48□□□□□ -0.57
Trem2Q99NH8 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.48□□□□□ -0.57
Trem2Q99NH8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trem2Q99NH8 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.47□□□□□ -0.57
Trem2Q99NH8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm28032-201ENSMUST00000184104 96 ntBASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.47□□□□□ -0.57
Trem2Q99NH8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.47□□□□□ -0.57
Trem2Q99NH8 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trem2Q99NH8 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trem2Q99NH8 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms