Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tlr3Q99MB1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm15615-201ENSMUST00000118876 198 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm14585-201ENSMUST00000120713 634 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm12516-201ENSMUST00000120819 385 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm23045-201ENSMUST00000175041 96 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm25072-201ENSMUST00000175233 235 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm43186-201ENSMUST00000198130 824 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.14□□□□□ -0.47
Tlr3Q99MB1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm8737-201ENSMUST00000122208 642 ntBASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Tlr3Q99MB1 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.12□□□□□ -0.47
Tlr3Q99MB1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.12□□□□□ -0.47
Tlr3Q99MB1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms