Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.4□□□□□ -0.1
Usp16Q99LG0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp16Q99LG0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm12463-201ENSMUST00000118271 849 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm13284-201ENSMUST00000121020 547 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm25072-201ENSMUST00000175233 235 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm45219-201ENSMUST00000205602 465 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm7600-201ENSMUST00000209657 785 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Usp16Q99LG0 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm25343-201ENSMUST00000157460 107 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm9139-201ENSMUST00000218817 700 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp16Q99LG0 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.38□□□□□ -0.11
Usp16Q99LG0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms