Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Gm5451-201ENSMUST00000080545 579 ntBASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb1Q91Y08 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm15528-201ENSMUST00000117821 864 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm8302-201ENSMUST00000119217 852 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm12566-201ENSMUST00000121479 359 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm37986-201ENSMUST00000193285 383 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb1Q91Y08 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 BC043934-202ENSMUST00000185694 2356 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm23272-201ENSMUST00000104053 129 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm14263-201ENSMUST00000117955 746 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm14395-201ENSMUST00000120494 563 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm4726-201ENSMUST00000135604 736 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Gm6019-201ENSMUST00000148369 736 ntBASIC11.71□□□□□ -0.53
Pcdhb1Q91Y08 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms