Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm3150-201ENSMUST00000166418 204 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm6439-201ENSMUST00000199849 862 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm6905-201ENSMUST00000205729 511 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.46□□□□□ -0.89
H1fooQ8VIK3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm8731-201ENSMUST00000118088 412 ntBASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm8342-201ENSMUST00000209839 757 ntBASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm5996-201ENSMUST00000211110 718 ntBASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
H1fooQ8VIK3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms