Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fam228aQ8CDW1 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm25700-201ENSMUST00000177693 110 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm38151-201ENSMUST00000195085 289 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm17812-201ENSMUST00000204935 318 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm18062-201ENSMUST00000208020 547 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm18055-201ENSMUST00000208254 547 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm6722-201ENSMUST00000221586 390 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fam228aQ8CDW1 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gm12742-201ENSMUST00000117326 410 ntBASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.8□□□□□ -0.52
Fam228aQ8CDW1 Gm15276-201ENSMUST00000145953 498 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms