Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm8731-201ENSMUST00000118088 412 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm15207-201ENSMUST00000119259 442 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm25951-201ENSMUST00000175330 64 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm21092-201ENSMUST00000178995 955 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm5982-201ENSMUST00000196234 512 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps53Q8CCB4 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm5714-201ENSMUST00000197343 566 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm19091-201ENSMUST00000208120 978 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm10254-201ENSMUST00000052888 867 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms