Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm12176-201ENSMUST00000121420 875 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm10179-201ENSMUST00000086233 688 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.87□□□□□ -0.51
Uba3Q8C878 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Uba3Q8C878 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Uba3Q8C878 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm12463-201ENSMUST00000118271 849 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm22846-201ENSMUST00000157706 270 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Uba3Q8C878 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Uba3Q8C878 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Uba3Q8C878 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.86□□□□□ -0.51
Uba3Q8C878 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Uba3Q8C878 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Uba3Q8C878 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Uba3Q8C878 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Uba3Q8C878 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Uba3Q8C878 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms