Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.86□□□□□ -0.51
Ccdc40Q8BI79 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm43966-201ENSMUST00000203301 612 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm45113-201ENSMUST00000207518 165 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm9257-201ENSMUST00000221254 232 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm10288-201ENSMUST00000084614 537 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm21811-201ENSMUST00000096485 930 ntBASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc40Q8BI79 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm2383-201ENSMUST00000181461 807 ntBASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm45575-201ENSMUST00000210283 548 ntBASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc40Q8BI79 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms