Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm4294-201ENSMUST00000105169 614 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm15617-201ENSMUST00000118973 771 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm15573-201ENSMUST00000119487 540 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm4726-201ENSMUST00000135604 736 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm6019-201ENSMUST00000148369 736 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm4654-201ENSMUST00000183305 982 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm37981-201ENSMUST00000194280 535 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim50Q810I2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.01□□□□□ -0.65
Trim50Q810I2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trim50Q810I2 Gm6560-201ENSMUST00000198588 1591 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11□□□□□ -0.65
Trim50Q810I2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trim50Q810I2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Trim50Q810I2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Gm25148-201ENSMUST00000104611 123 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11□□□□□ -0.65
Trim50Q810I2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11□□□□□ -0.65
Trim50Q810I2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11□□□□□ -0.65
Trim50Q810I2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Mir8115-201ENSMUST00000184992 119 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Gm43186-201ENSMUST00000198130 824 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Gm9353-201ENSMUST00000200472 604 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Gm44100-201ENSMUST00000204329 436 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11□□□□□ -0.65
Trim50Q810I2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11□□□□□ -0.65
Trim50Q810I2 AC154276.3-201ENSMUST00000227643 998 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trim50Q810I2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim50Q810I2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11□□□□□ -0.65
Trim50Q810I2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Gm5171-201ENSMUST00000214944 1415 ntBASIC11□□□□□ -0.65
Trim50Q810I2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11□□□□□ -0.65
Trim50Q810I2 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim50Q810I2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim50Q810I2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms