Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf38bQ80SY5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm22594-201ENSMUST00000104251 130 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm12712-201ENSMUST00000120676 801 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm10169-201ENSMUST00000121822 348 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm24248-201ENSMUST00000157321 322 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm6390-201ENSMUST00000215034 589 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.98□□□□□ -0.49
Prpf38bQ80SY5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm9625-201ENSMUST00000180422 955 ntBASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm44506-201ENSMUST00000206278 965 ntBASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm5705-201ENSMUST00000066241 711 ntBASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prpf38bQ80SY5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms