Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx55Q6ZPL9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm12337-201ENSMUST00000119634 400 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm8152-201ENSMUST00000120842 637 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm44605-201ENSMUST00000206892 949 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx55Q6ZPL9 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm12745-201ENSMUST00000121767 214 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm43564-201ENSMUST00000196185 211 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx55Q6ZPL9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms