Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm4294-201ENSMUST00000105169 614 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm8731-201ENSMUST00000118088 412 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm12407-201ENSMUST00000180219 324 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm21811-201ENSMUST00000096485 930 ntBASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rad54bQ6PFE3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm13461-201ENSMUST00000120980 662 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm18730-201ENSMUST00000218038 343 ntBASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rad54bQ6PFE3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rad54bQ6PFE3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms