Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Snord17-201ENSMUST00000104526 238 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm8754-201ENSMUST00000118391 520 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.39□□□□□ -0.75
AtmQ62388 Mir6930-201ENSMUST00000183859 68 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm18299-201ENSMUST00000192026 636 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm2328-201ENSMUST00000193525 535 ntBASIC10.39□□□□□ -0.75
AtmQ62388 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm25483-201ENSMUST00000083224 227 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
AtmQ62388 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.39□□□□□ -0.75
AtmQ62388 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm44640-201ENSMUST00000206894 247 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Gm18030-201ENSMUST00000222163 731 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.39□□□□□ -0.75
AtmQ62388 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
AtmQ62388 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.39□□□□□ -0.75
AtmQ62388 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC10.39□□□□□ -0.75
AtmQ62388 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
AtmQ62388 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
AtmQ62388 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
AtmQ62388 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
AtmQ62388 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC10.38□□□□□ -0.75
AtmQ62388 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
AtmQ62388 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Gm10020-201ENSMUST00000081993 612 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Gm10238-201ENSMUST00000089689 408 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.38□□□□□ -0.75
AtmQ62388 Gm23479-201ENSMUST00000158876 122 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Gm16301-201ENSMUST00000161959 295 ntBASIC10.38□□□□□ -0.75
AtmQ62388 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.38□□□□□ -0.75
AtmQ62388 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
AtmQ62388 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 AU015228-201ENSMUST00000121103 1320 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.38□□□□□ -0.75
AtmQ62388 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
AtmQ62388 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
AtmQ62388 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
AtmQ62388 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
AtmQ62388 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
AtmQ62388 Gm15570-201ENSMUST00000122093 625 ntBASIC10.37□□□□□ -0.75
AtmQ62388 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
AtmQ62388 Gm17799-201ENSMUST00000183270 667 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms