Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Rai1Q61818 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rai1Q61818 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rai1Q61818 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Matn2-203ENSMUST00000226766 3252 ntBASIC10.79□□□□□ -0.68
Rai1Q61818 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rai1Q61818 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Rai1Q61818 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.79□□□□□ -0.68
Rai1Q61818 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rai1Q61818 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rai1Q61818 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Rai1Q61818 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rai1Q61818 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 Mir6387-201ENSMUST00000184042 108 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm19918-201ENSMUST00000194858 400 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm43547-201ENSMUST00000197729 328 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm6518-201ENSMUST00000208450 342 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm45258-201ENSMUST00000210042 853 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rai1Q61818 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm23595-201ENSMUST00000104306 130 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm16209-201ENSMUST00000118457 627 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm25288-201ENSMUST00000122800 265 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm10171-201ENSMUST00000126220 628 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm2345-201ENSMUST00000193451 589 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm40414-201ENSMUST00000197608 481 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Wbp1-209ENSMUST00000205023 716 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Gm10233-201ENSMUST00000089275 628 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.78□□□□□ -0.68
Rai1Q61818 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rai1Q61818 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.78□□□□□ -0.68
Rai1Q61818 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rai1Q61818 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rai1Q61818 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Rai1Q61818 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rai1Q61818 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rai1Q61818 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rai1Q61818 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rai1Q61818 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.77□□□□□ -0.69
Rai1Q61818 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms