Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm44742-201ENSMUST00000207190 1412 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm14388-201ENSMUST00000118119 477 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm14480-201ENSMUST00000118521 433 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Klra14-ps-201ENSMUST00000119532 802 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm6451-201ENSMUST00000121488 717 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm29663-201ENSMUST00000186962 853 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC8.75□□□□□ -1.01
Foxc1Q61572 AA914427-201ENSMUST00000193194 1166 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Rprl1-202ENSMUST00000198476 238 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm18690-201ENSMUST00000204488 985 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm19187-201ENSMUST00000206781 892 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 AC154252.2-201ENSMUST00000223593 767 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 AC163667.3-201ENSMUST00000225774 222 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 AC123735.1-201ENSMUST00000227358 605 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm44942-201ENSMUST00000096093 2072 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.75□□□□□ -1.01
Foxc1Q61572 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
Foxc1Q61572 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Foxc1Q61572 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 CT025681.1-201ENSMUST00000225453 1855 ntBASIC8.74□□□□□ -1.01
Foxc1Q61572 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.74□□□□□ -1.01
Foxc1Q61572 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Foxc1Q61572 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Foxc1Q61572 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC8.74□□□□□ -1.01
Foxc1Q61572 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Foxc1Q61572 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms