Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps54Q5SPW0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.52□□□□□ -0.24
Vps54Q5SPW0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps54Q5SPW0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm12463-201ENSMUST00000118271 849 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps54Q5SPW0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm6407-201ENSMUST00000176468 549 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm29410-201ENSMUST00000188383 694 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps54Q5SPW0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.51□□□□□ -0.25
Vps54Q5SPW0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms