Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm11957-201ENSMUST00000118304 779 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm22119-201ENSMUST00000175594 99 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm9081-201ENSMUST00000182346 991 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm43969-201ENSMUST00000204833 535 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm39288-201ENSMUST00000210554 446 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm12791-201ENSMUST00000120788 655 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm43163-201ENSMUST00000196571 442 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm7940-201ENSMUST00000218195 769 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp48Q3V0C5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp48Q3V0C5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm9673-201ENSMUST00000119287 781 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23400-201ENSMUST00000174994 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm26463-201ENSMUST00000175065 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm24332-201ENSMUST00000175102 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25959-201ENSMUST00000175112 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm22475-201ENSMUST00000175169 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm22903-201ENSMUST00000175193 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25070-201ENSMUST00000175237 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm24159-201ENSMUST00000175264 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25299-201ENSMUST00000175283 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23798-201ENSMUST00000175560 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23802-201ENSMUST00000175565 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25708-201ENSMUST00000177687 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm24370-201ENSMUST00000178007 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23049-201ENSMUST00000178068 102 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms