Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
Znf48Q3US17 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Znf48Q3US17 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Znf48Q3US17 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Znf48Q3US17 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Znf48Q3US17 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.69□□□□□ -0.86
Znf48Q3US17 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Znf48Q3US17 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Mir466f-3-201ENSMUST00000104788 94 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm44124-201ENSMUST00000204159 472 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Znf48Q3US17 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm26035-201ENSMUST00000083065 308 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Znf48Q3US17 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.68□□□□□ -0.86
Znf48Q3US17 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Znf48Q3US17 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms