Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm11509-201ENSMUST00000117358 325 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm11783-201ENSMUST00000119549 885 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm45113-201ENSMUST00000207518 165 ntBASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim43aQ3TL54 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm15207-201ENSMUST00000119259 442 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm11573-201ENSMUST00000119956 394 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm2260-201ENSMUST00000184965 657 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm37597-201ENSMUST00000191853 382 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm9353-201ENSMUST00000200472 604 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm17827-201ENSMUST00000211825 742 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43aQ3TL54 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms