Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.5□□□□□ -0.57
Ebf1Q07802 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf1Q07802 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf1Q07802 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Cog3-203ENSMUST00000227473 4197 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm11560-201ENSMUST00000117567 948 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm16219-201ENSMUST00000120096 274 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm25554-201ENSMUST00000158075 113 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm26989-201ENSMUST00000182608 749 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm43163-201ENSMUST00000196571 442 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm17825-201ENSMUST00000206836 794 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm18204-201ENSMUST00000209835 793 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm45500-201ENSMUST00000211676 803 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf1Q07802 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.49□□□□□ -0.57
Ebf1Q07802 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf1Q07802 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm4294-201ENSMUST00000105169 614 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm15036-201ENSMUST00000118880 400 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm28833-201ENSMUST00000189671 559 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm43380-201ENSMUST00000200421 220 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm44647-201ENSMUST00000207402 428 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.48□□□□□ -0.57
Ebf1Q07802 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms