Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm11850-201ENSMUST00000119679 479 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm44615-201ENSMUST00000206548 358 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm44658-201ENSMUST00000207965 637 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a1Q05722 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.57□□□□□ -0.56
Col9a1Q05722 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.57□□□□□ -0.56
Col9a1Q05722 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a1Q05722 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm17042-201ENSMUST00000167075 1216 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm8513-201ENSMUST00000182830 1003 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Olfr1055-202ENSMUST00000188023 939 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm43928-201ENSMUST00000203737 409 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm8703-201ENSMUST00000203793 730 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm18621-201ENSMUST00000222677 679 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Olfr1234-201ENSMUST00000099783 945 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms