Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm19918-201ENSMUST00000194858 400 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm6331-201ENSMUST00000217890 450 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm11952-201ENSMUST00000121172 821 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Snord55-201ENSMUST00000174939 79 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm7627-201ENSMUST00000183205 999 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 AC152169.1-201ENSMUST00000223901 701 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.16□□□□□ -0.14
Smarcc1P97496 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcc1P97496 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcc1P97496 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm16165-201ENSMUST00000160140 795 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm6612-201ENSMUST00000170777 395 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm7589-201ENSMUST00000085631 534 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms