Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.24□□□□□ -0.45
CiitaP79621 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Gm29155-201ENSMUST00000185910 269 ntBASIC12.24□□□□□ -0.45
CiitaP79621 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.24□□□□□ -0.45
CiitaP79621 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CiitaP79621 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.24□□□□□ -0.45
CiitaP79621 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.24□□□□□ -0.45
CiitaP79621 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CiitaP79621 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CiitaP79621 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CiitaP79621 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.23□□□□□ -0.45
CiitaP79621 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.23□□□□□ -0.45
CiitaP79621 Gm4917-201ENSMUST00000121452 650 ntBASIC12.23□□□□□ -0.45
CiitaP79621 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.23□□□□□ -0.45
CiitaP79621 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.23□□□□□ -0.45
CiitaP79621 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CiitaP79621 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CiitaP79621 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CiitaP79621 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CiitaP79621 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.22□□□□□ -0.45
CiitaP79621 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
CiitaP79621 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CiitaP79621 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Gm12990-201ENSMUST00000120372 468 ntBASIC12.22□□□□□ -0.45
CiitaP79621 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.22□□□□□ -0.45
CiitaP79621 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CiitaP79621 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms