Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cux2P70298 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC18.15■□□□□ 0.5
Cux2P70298 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC18.15■□□□□ 0.5
Cux2P70298 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC18.15■□□□□ 0.5
Cux2P70298 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cux2P70298 Mir3060-201ENSMUST00000175339 83 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC18.15■□□□□ 0.5
Cux2P70298 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm33366-201ENSMUST00000195583 3827 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC18.15■□□□□ 0.5
Cux2P70298 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm9515-201ENSMUST00000200276 647 ntBASIC18.15■□□□□ 0.5
Cux2P70298 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC18.15■□□□□ 0.5
Cux2P70298 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm25483-201ENSMUST00000083224 227 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cux2P70298 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm6713-201ENSMUST00000216137 1446 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Gm17107-201ENSMUST00000170983 553 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Gm21963-201ENSMUST00000179519 330 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC18.15■□□□□ 0.5
Cux2P70298 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm8960-201ENSMUST00000219787 788 ntBASIC18.15■□□□□ 0.5
Cux2P70298 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 AC130217.1-201ENSMUST00000224146 909 ntBASIC18.15■□□□□ 0.5
Cux2P70298 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cux2P70298 Gm5507-201ENSMUST00000091897 1008 ntBASIC18.15■□□□□ 0.5
Cux2P70298 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cux2P70298 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cux2P70298 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cux2P70298 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC18.14■□□□□ 0.49
Cux2P70298 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cux2P70298 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cux2P70298 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Cux2P70298 Gm13002-201ENSMUST00000119286 682 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC18.14■□□□□ 0.49
Cux2P70298 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC18.14■□□□□ 0.49
Cux2P70298 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC18.14■□□□□ 0.49
Cux2P70298 Gm17147-201ENSMUST00000164176 432 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC18.14■□□□□ 0.49
Cux2P70298 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Gm37860-201ENSMUST00000195380 1034 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Gm5845-201ENSMUST00000195812 796 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Ksr1-207ENSMUST00000226282 5260 ntBASIC18.14■□□□□ 0.49
Cux2P70298 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cux2P70298 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Cux2P70298 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 Gm9523-201ENSMUST00000199146 1159 ntBASIC18.13■□□□□ 0.49
Cux2P70298 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cux2P70298 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 176.6 ms