Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm4726-201ENSMUST00000135604 736 ntBASIC10.59□□□□□ -0.71
Six5P70178 B9d1os-201ENSMUST00000137010 674 ntBASIC10.59□□□□□ -0.71
Six5P70178 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm6019-201ENSMUST00000148369 736 ntBASIC10.59□□□□□ -0.71
Six5P70178 Gm15881-201ENSMUST00000148792 942 ntBASIC10.59□□□□□ -0.71
Six5P70178 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Six5P70178 Gm21778-201ENSMUST00000178779 471 ntBASIC10.59□□□□□ -0.71
Six5P70178 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.59□□□□□ -0.71
Six5P70178 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.59□□□□□ -0.71
Six5P70178 Gm43916-201ENSMUST00000205062 967 ntBASIC10.59□□□□□ -0.71
Six5P70178 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.59□□□□□ -0.71
Six5P70178 Gm45398-201ENSMUST00000210561 165 ntBASIC10.59□□□□□ -0.71
Six5P70178 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.59□□□□□ -0.71
Six5P70178 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.59□□□□□ -0.71
Six5P70178 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Six5P70178 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.59□□□□□ -0.71
Six5P70178 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.59□□□□□ -0.71
Six5P70178 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.58□□□□□ -0.72
Six5P70178 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.58□□□□□ -0.72
Six5P70178 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.58□□□□□ -0.72
Six5P70178 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Six5P70178 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.58□□□□□ -0.72
Six5P70178 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.58□□□□□ -0.72
Six5P70178 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.58□□□□□ -0.72
Six5P70178 Gm43138-201ENSMUST00000199123 708 ntBASIC10.58□□□□□ -0.72
Six5P70178 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.58□□□□□ -0.72
Six5P70178 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.58□□□□□ -0.72
Six5P70178 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.58□□□□□ -0.72
Six5P70178 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Six5P70178 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Six5P70178 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Six5P70178 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Six5P70178 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Six5P70178 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Six5P70178 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Six5P70178 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.57□□□□□ -0.72
Six5P70178 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Six5P70178 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms