Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm17376-201ENSMUST00000166016 84 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm5070-201ENSMUST00000177599 862 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm38117-201ENSMUST00000194653 939 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm37301-201ENSMUST00000195412 568 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm43037-201ENSMUST00000196808 250 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm19187-201ENSMUST00000206781 892 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.05□□□□□ -0.8
Sf3b6P59708 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sf3b6P59708 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sf3b6P59708 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sf3b6P59708 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm7150-201ENSMUST00000122032 981 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm25890-201ENSMUST00000177643 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm22614-201ENSMUST00000178300 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm44651-201ENSMUST00000207343 372 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm22042-201ENSMUST00000082989 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm26110-201ENSMUST00000083971 165 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.04□□□□□ -0.8
Sf3b6P59708 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sf3b6P59708 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms