Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.54□□□□□ -0.56
Tubgcp3P58854 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tubgcp3P58854 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tubgcp3P58854 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tubgcp3P58854 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tubgcp3P58854 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm4909-201ENSMUST00000118749 794 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Olfml3-204ENSMUST00000169286 874 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm19208-201ENSMUST00000213861 912 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.53□□□□□ -0.56
Tubgcp3P58854 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.53□□□□□ -0.56
Tubgcp3P58854 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.52□□□□□ -0.56
Tubgcp3P58854 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tubgcp3P58854 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm22920-201ENSMUST00000102175 109 ntBASIC11.52□□□□□ -0.57
Tubgcp3P58854 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm15549-201ENSMUST00000121595 622 ntBASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm37835-201ENSMUST00000193305 361 ntBASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm9353-201ENSMUST00000200472 604 ntBASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm17825-201ENSMUST00000206836 794 ntBASIC11.52□□□□□ -0.57
Tubgcp3P58854 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tubgcp3P58854 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms