Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.26□□□□□ -0.13
Msh6P54276 Gm16459-201ENSMUST00000121443 686 ntBASIC14.26□□□□□ -0.13
Msh6P54276 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Msh6P54276 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.26□□□□□ -0.13
Msh6P54276 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.26□□□□□ -0.13
Msh6P54276 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Msh6P54276 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.26□□□□□ -0.13
Msh6P54276 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.26□□□□□ -0.13
Msh6P54276 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Msh6P54276 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Msh6P54276 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh6P54276 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Msh6P54276 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msh6P54276 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msh6P54276 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Msh6P54276 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC14.25□□□□□ -0.13
Msh6P54276 Gm14592-201ENSMUST00000117201 560 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Gm15136-201ENSMUST00000120552 533 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.25□□□□□ -0.13
Msh6P54276 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.25□□□□□ -0.13
Msh6P54276 Gm5529-201ENSMUST00000165691 891 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Gm20781-201ENSMUST00000193154 693 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Gm6606-201ENSMUST00000193613 947 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Gm21736-201ENSMUST00000195399 693 ntBASIC14.25□□□□□ -0.13
Msh6P54276 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.25□□□□□ -0.13
Msh6P54276 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Msh6P54276 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.25□□□□□ -0.13
Msh6P54276 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.25□□□□□ -0.13
Msh6P54276 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh6P54276 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh6P54276 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh6P54276 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.24□□□□□ -0.13
Msh6P54276 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh6P54276 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
Msh6P54276 Gm15625-201ENSMUST00000117617 1093 ntBASIC14.24□□□□□ -0.13
Msh6P54276 Gm11993-201ENSMUST00000121861 820 ntBASIC14.24□□□□□ -0.13
Msh6P54276 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh6P54276 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.24□□□□□ -0.13
Msh6P54276 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Msh6P54276 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Gm7589-201ENSMUST00000085631 534 ntBASIC14.24□□□□□ -0.13
Msh6P54276 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh6P54276 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC14.24□□□□□ -0.13
Msh6P54276 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.24□□□□□ -0.13
Msh6P54276 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh6P54276 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Msh6P54276 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh6P54276 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh6P54276 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.24□□□□□ -0.13
Msh6P54276 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Msh6P54276 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Msh6P54276 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms