Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.28□□□□□ -0.6
Atxn1P54254 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm4462-201ENSMUST00000166453 492 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm43163-201ENSMUST00000196571 442 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Gm44216-201ENSMUST00000203942 157 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm45094-201ENSMUST00000207013 617 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Gm45310-201ENSMUST00000210436 275 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.28□□□□□ -0.6
Atxn1P54254 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Atxn1P54254 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Atxn1P54254 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.27□□□□□ -0.6
Atxn1P54254 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Atxn1P54254 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.27□□□□□ -0.6
Atxn1P54254 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Atxn1P54254 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atxn1P54254 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.27□□□□□ -0.61
Atxn1P54254 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.27□□□□□ -0.61
Atxn1P54254 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.27□□□□□ -0.61
Atxn1P54254 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.27□□□□□ -0.61
Atxn1P54254 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Mir6953-201ENSMUST00000184745 68 ntBASIC11.27□□□□□ -0.61
Atxn1P54254 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.27□□□□□ -0.61
Atxn1P54254 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.27□□□□□ -0.61
Atxn1P54254 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
Atxn1P54254 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.27□□□□□ -0.61
Atxn1P54254 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atxn1P54254 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.27□□□□□ -0.61
Atxn1P54254 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.26□□□□□ -0.61
Atxn1P54254 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atxn1P54254 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.26□□□□□ -0.61
Atxn1P54254 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atxn1P54254 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atxn1P54254 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.26□□□□□ -0.61
Atxn1P54254 Gm25554-201ENSMUST00000158075 113 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms