Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Gli1P47806 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Gli1P47806 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gli1P47806 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gli1P47806 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Gli1P47806 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Gli1P47806 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Gli1P47806 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Gli1P47806 Gm11941-201ENSMUST00000119904 610 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Gm14460-201ENSMUST00000121511 639 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Gm9540-201ENSMUST00000188230 478 ntBASIC11.04□□□□□ -0.64
Gli1P47806 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.04□□□□□ -0.64
Gli1P47806 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.04□□□□□ -0.64
Gli1P47806 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.04□□□□□ -0.64
Gli1P47806 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Gli1P47806 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Gli1P47806 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.04□□□□□ -0.64
Gli1P47806 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Gli1P47806 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gli1P47806 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.03□□□□□ -0.64
Gli1P47806 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Gli1P47806 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.03□□□□□ -0.64
Gli1P47806 Gm15004-201ENSMUST00000119192 630 ntBASIC11.03□□□□□ -0.64
Gli1P47806 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms