Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox18P43680 Gm23105-201ENSMUST00000083719 134 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox18P43680 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox18P43680 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.15□□□□□ -0.62
Sox18P43680 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm11996-201ENSMUST00000117538 915 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox18P43680 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm18776-201ENSMUST00000188833 654 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm45085-201ENSMUST00000209100 441 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox18P43680 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox18P43680 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 AC124569.4-201ENSMUST00000223830 1220 ntBASIC11.15□□□□□ -0.62
Sox18P43680 AC154646.1-201ENSMUST00000225011 1092 ntBASIC11.15□□□□□ -0.62
Sox18P43680 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox18P43680 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox18P43680 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox18P43680 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sox18P43680 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.15□□□□□ -0.63
Sox18P43680 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.15□□□□□ -0.63
Sox18P43680 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.15□□□□□ -0.63
Sox18P43680 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sox18P43680 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Sox18P43680 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gm37891-201ENSMUST00000195585 1326 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox18P43680 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sox18P43680 Gm23255-201ENSMUST00000102244 110 ntBASIC11.14□□□□□ -0.63
Sox18P43680 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms