Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm22846-201ENSMUST00000157706 270 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm25881-201ENSMUST00000157783 103 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Olfml3-204ENSMUST00000169286 874 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm7584-201ENSMUST00000175829 940 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm45856-201ENSMUST00000212752 416 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.89□□□□□ -0.67
Tnfsf4P43488 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfsf4P43488 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm13916-201ENSMUST00000117368 628 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm13350-201ENSMUST00000120519 479 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm10288-201ENSMUST00000084614 537 ntBASIC10.88□□□□□ -0.67
Tnfsf4P43488 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf4P43488 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf4P43488 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.87□□□□□ -0.67
Tnfsf4P43488 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsf4P43488 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf4P43488 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms