Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.75□□□□□ -0.69
Cdx2P43241 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cdx2P43241 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Cdx2P43241 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdx2P43241 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdx2P43241 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm4917-201ENSMUST00000121452 650 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm11942-201ENSMUST00000180255 345 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.74□□□□□ -0.69
Cdx2P43241 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Cdx2P43241 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.74□□□□□ -0.69
Cdx2P43241 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.74□□□□□ -0.69
Cdx2P43241 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Cdx2P43241 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdx2P43241 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdx2P43241 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdx2P43241 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdx2P43241 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.73□□□□□ -0.69
Cdx2P43241 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdx2P43241 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdx2P43241 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdx2P43241 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdx2P43241 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdx2P43241 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.73□□□□□ -0.69
Cdx2P43241 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms