Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm19798-201ENSMUST00000201502 457 ntBASIC11.6□□□□□ -0.55
HttP42859 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.6□□□□□ -0.55
HttP42859 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HttP42859 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Gm15383-201ENSMUST00000121889 1443 ntBASIC11.6□□□□□ -0.55
HttP42859 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.6□□□□□ -0.55
HttP42859 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.6□□□□□ -0.55
HttP42859 AC130671.3-201ENSMUST00000227393 1897 ntBASIC11.6□□□□□ -0.55
HttP42859 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC11.6□□□□□ -0.55
HttP42859 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HttP42859 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Gm37012-201ENSMUST00000194991 1078 ntBASIC11.6□□□□□ -0.55
HttP42859 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.6□□□□□ -0.55
HttP42859 Gm2716-201ENSMUST00000212350 643 ntBASIC11.6□□□□□ -0.55
HttP42859 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.6□□□□□ -0.55
HttP42859 AC124400.2-201ENSMUST00000224939 253 ntBASIC11.6□□□□□ -0.55
HttP42859 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
HttP42859 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
HttP42859 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.6□□□□□ -0.55
HttP42859 Mir1893-201ENSMUST00000122565 83 ntBASIC11.6□□□□□ -0.55
HttP42859 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Gm3889-201ENSMUST00000212467 612 ntBASIC11.6□□□□□ -0.55
HttP42859 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HttP42859 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
HttP42859 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.6□□□□□ -0.55
HttP42859 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HttP42859 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HttP42859 Gm44907-201ENSMUST00000207423 1633 ntBASIC11.59□□□□□ -0.55
HttP42859 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.59□□□□□ -0.55
HttP42859 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HttP42859 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HttP42859 Gm18623-201ENSMUST00000219860 953 ntBASIC11.59□□□□□ -0.55
HttP42859 AC154506.2-201ENSMUST00000225481 1276 ntBASIC11.59□□□□□ -0.55
HttP42859 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.59□□□□□ -0.55
HttP42859 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HttP42859 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.59□□□□□ -0.55
HttP42859 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC11.59□□□□□ -0.55
HttP42859 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HttP42859 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.59□□□□□ -0.55
HttP42859 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.59□□□□□ -0.55
HttP42859 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HttP42859 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HttP42859 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HttP42859 Gm7001-201ENSMUST00000219384 1465 ntBASIC11.59□□□□□ -0.55
HttP42859 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.58□□□□□ -0.55
HttP42859 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
HttP42859 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HttP42859 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
HttP42859 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HttP42859 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.58□□□□□ -0.56
HttP42859 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Gm6633-201ENSMUST00000173851 270 ntBASIC11.58□□□□□ -0.56
HttP42859 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.58□□□□□ -0.56
HttP42859 Gm7997-201ENSMUST00000210546 980 ntBASIC11.58□□□□□ -0.56
HttP42859 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Gm6129-201ENSMUST00000220725 801 ntBASIC11.58□□□□□ -0.56
HttP42859 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms