Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.71□□□□□ -0.85
Slc6a1P31648 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Slc6a1P31648 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Slc6a1P31648 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Slc6a1P31648 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.71□□□□□ -0.86
Slc6a1P31648 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Gm13736-201ENSMUST00000119272 253 ntBASIC9.71□□□□□ -0.86
Slc6a1P31648 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.71□□□□□ -0.86
Slc6a1P31648 Gm29199-201ENSMUST00000187766 775 ntBASIC9.71□□□□□ -0.86
Slc6a1P31648 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.71□□□□□ -0.86
Slc6a1P31648 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.71□□□□□ -0.86
Slc6a1P31648 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Slc6a1P31648 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.71□□□□□ -0.86
Slc6a1P31648 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.71□□□□□ -0.86
Slc6a1P31648 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Slc6a1P31648 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm15808-201ENSMUST00000119046 604 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.7□□□□□ -0.86
Slc6a1P31648 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm25890-201ENSMUST00000177643 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm22614-201ENSMUST00000178300 165 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm5950-201ENSMUST00000213337 772 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm6082-201ENSMUST00000215204 454 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Slc6a1P31648 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.7□□□□□ -0.86
Slc6a1P31648 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Slc6a1P31648 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms