Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm14071-201ENSMUST00000117817 509 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm5867-201ENSMUST00000063197 592 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nedd8P29595 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nedd8P29595 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Nedd8P29595 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.33□□□□□ -0.76
Nedd8P29595 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.33□□□□□ -0.76
Nedd8P29595 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm11591-201ENSMUST00000120063 702 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm14832-201ENSMUST00000121289 322 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.33□□□□□ -0.76
Nedd8P29595 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm7809-201ENSMUST00000153199 742 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm3890-201ENSMUST00000182416 207 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.33□□□□□ -0.76
Nedd8P29595 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.33□□□□□ -0.76
Nedd8P29595 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nedd8P29595 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nedd8P29595 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.33□□□□□ -0.76
Nedd8P29595 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.32□□□□□ -0.76
Nedd8P29595 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms