Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.71□□□□□ -0.53
H2afxP27661 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.71□□□□□ -0.53
H2afxP27661 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
H2afxP27661 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.71□□□□□ -0.53
H2afxP27661 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afxP27661 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afxP27661 Gm2423-201ENSMUST00000074863 733 ntBASIC11.71□□□□□ -0.53
H2afxP27661 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H2afxP27661 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
H2afxP27661 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
H2afxP27661 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.71□□□□□ -0.54
H2afxP27661 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
H2afxP27661 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 AC153498.1-201ENSMUST00000219775 2722 ntBASIC11.7□□□□□ -0.54
H2afxP27661 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
H2afxP27661 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gm15953-201ENSMUST00000117656 1732 ntBASIC11.7□□□□□ -0.54
H2afxP27661 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gm14644-201ENSMUST00000116671 647 ntBASIC11.7□□□□□ -0.54
H2afxP27661 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.7□□□□□ -0.54
H2afxP27661 Gm1335-201ENSMUST00000121653 386 ntBASIC11.7□□□□□ -0.54
H2afxP27661 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
H2afxP27661 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.7□□□□□ -0.54
H2afxP27661 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.7□□□□□ -0.54
H2afxP27661 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.7□□□□□ -0.54
H2afxP27661 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
H2afxP27661 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.69□□□□□ -0.54
H2afxP27661 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.69□□□□□ -0.54
H2afxP27661 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
H2afxP27661 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.69□□□□□ -0.54
H2afxP27661 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afxP27661 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Gm16177-201ENSMUST00000120728 718 ntBASIC11.69□□□□□ -0.54
H2afxP27661 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.69□□□□□ -0.54
H2afxP27661 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.69□□□□□ -0.54
H2afxP27661 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.69□□□□□ -0.54
H2afxP27661 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.69□□□□□ -0.54
H2afxP27661 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.69□□□□□ -0.54
H2afxP27661 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.69□□□□□ -0.54
H2afxP27661 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.69□□□□□ -0.54
H2afxP27661 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.69□□□□□ -0.54
H2afxP27661 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afxP27661 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afxP27661 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H2afxP27661 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.69□□□□□ -0.54
H2afxP27661 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
H2afxP27661 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2afxP27661 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms