Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Gm13996-201ENSMUST00000118456 430 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.88□□□□□ -0.67
BdnfP21237 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.88□□□□□ -0.67
BdnfP21237 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
BdnfP21237 Mir1938-201ENSMUST00000158746 100 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Gm42826-201ENSMUST00000197548 2639 ntBASIC10.88□□□□□ -0.67
BdnfP21237 AY036118-201ENSMUST00000200021 923 ntBASIC10.88□□□□□ -0.67
BdnfP21237 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.88□□□□□ -0.67
BdnfP21237 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
BdnfP21237 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
BdnfP21237 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
BdnfP21237 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.88□□□□□ -0.67
BdnfP21237 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
BdnfP21237 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm37367-201ENSMUST00000191771 2602 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
BdnfP21237 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.87□□□□□ -0.67
BdnfP21237 Gm25668-201ENSMUST00000157700 129 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.87□□□□□ -0.67
BdnfP21237 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.87□□□□□ -0.67
BdnfP21237 Gm38117-201ENSMUST00000194653 939 ntBASIC10.87□□□□□ -0.67
BdnfP21237 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.87□□□□□ -0.67
BdnfP21237 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.87□□□□□ -0.67
BdnfP21237 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.87□□□□□ -0.67
BdnfP21237 Rps4l-202ENSMUST00000204242 789 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm45433-201ENSMUST00000209386 247 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.87□□□□□ -0.67
BdnfP21237 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms