Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.39□□□□□ -0.59
VimP20152 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm27486-201ENSMUST00000184923 80 ntBASIC11.39□□□□□ -0.59
VimP20152 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.39□□□□□ -0.59
VimP20152 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.39□□□□□ -0.59
VimP20152 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.39□□□□□ -0.59
VimP20152 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VimP20152 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.39□□□□□ -0.59
VimP20152 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.39□□□□□ -0.59
VimP20152 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.39□□□□□ -0.59
VimP20152 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VimP20152 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
VimP20152 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VimP20152 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VimP20152 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.38□□□□□ -0.59
VimP20152 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.38□□□□□ -0.59
VimP20152 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.38□□□□□ -0.59
VimP20152 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.38□□□□□ -0.59
VimP20152 Gm14071-201ENSMUST00000117817 509 ntBASIC11.38□□□□□ -0.59
VimP20152 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.38□□□□□ -0.59
VimP20152 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.38□□□□□ -0.59
VimP20152 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.38□□□□□ -0.59
VimP20152 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.38□□□□□ -0.59
VimP20152 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm24845-201ENSMUST00000158034 109 ntBASIC11.38□□□□□ -0.59
VimP20152 Gm25043-201ENSMUST00000158604 212 ntBASIC11.38□□□□□ -0.59
VimP20152 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VimP20152 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VimP20152 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm27847-201ENSMUST00000183711 107 ntBASIC11.38□□□□□ -0.59
VimP20152 Gm27375-201ENSMUST00000183799 107 ntBASIC11.38□□□□□ -0.59
VimP20152 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.38□□□□□ -0.59
VimP20152 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.38□□□□□ -0.59
VimP20152 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.38□□□□□ -0.59
VimP20152 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.38□□□□□ -0.59
VimP20152 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
VimP20152 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VimP20152 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VimP20152 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
VimP20152 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VimP20152 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
VimP20152 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.37□□□□□ -0.59
VimP20152 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VimP20152 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms